Fellow Le'lit users unite!
I'm 3 months into ownership and have experienced many of the problems that you described. 5 seconds of dark goodness and then straight to blond? Ugh, it's a classic problem.
Usually what this indicates is channeling in the puck, where a small hole lets all of the water through and over extracts one area. While temperature problems could be an issue, I'm pretty sure that channeling has been my main problem.
What a naked/bottomless portafilter does is allow you to see such problems as they happen. It's a diagnosis tool. I don't have a naked portafilter yet either, I'm waiting for some more cash to buy another portafilter (I want one "normal" and one naked).
I've been slowly improving my shots recently though. I think that the two biggest concerns are distribution and dose. Recently I've been distributing the coffee more evenly in my basket with faster doser lever pulls and basket rotation. It's worth looking into the
Weiss Distribution Technique (WDT) as another alternative. I also am beginning to think that the Le'lit is very dose sensitive. With too much shower screen clearance, the puck seems to rupture easily. Getting the puck to kiss the shower screen after expansion is difficult (no scale for me yet), but might be a good choice. I've been having some luck lately by letting the puck expand fully into the shower screen. With more coffee to control the flow, it seems to change colors a bit more evenly. I have updosed by gently tapping the portafilter with grind in it, and then leveling the top.
To be honest though, I'm also starting to wonder if there is just too much pressure. Without an adjustable OPV it is difficult regulate. I know, I know! The barista is usually at fault! But the pressure profile curve for Ulka pumps means that ristretto shots could be generating 12bar of pressure, which would only exacerbate any channeling issues. I'm currently contemplating some mods...